R Interface to Europe PMC RESTful Web Service
Open-source AI research assistant for VS Code + GitHub Copilot. Connects to PubMed, OpenAlex, Semantic Scholar, Europe PMC, CrossRef, and Zotero via MCP servers. Custom agents guide systematic reviews, academic writing, data analysis, and project management — all ICMJE-compliant with full audit trails.
Information extraction from unstructured text to build a knowledge graph using techniques from traditional NLP to pre-trained transformers and LLMs for NER and Linking, and Relation Extraction.
🔬 Professional MCP server for biomedical literature research — 40 tools, multi-source search (PubMed, Europe PMC, CORE, OpenAlex), full-text access, citation networks, PICO analysis, and more
A Java command-line tool and library to download and store publications with metadata by combining content from various online resources
QTLTableMiner++ tool for mining tables in scientific articles
Tool for visualization of research papers that have common accession numbers
Code associated with our 2018 review in Current Opinion in Systems Biology
NLP-powered tool to discover and classify biodiversity genomics publications using Europe PMC API
Add a description, image, and links to the europe-pmc topic page so that developers can more easily learn about it.
To associate your repository with the europe-pmc topic, visit your repo's landing page and select "manage topics."