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singel-cell-sequencing

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rezakj / iCellR

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iCellR is an interactive R package designed to facilitate the analysis and visualization of high-throughput single-cell sequencing data. It supports a variety of single-cell technologies, including scRNA-seq, scVDJ-seq, scATAC-seq, CITE-Seq, and Spatial Transcriptomics (ST).

clustering dropout batch-normalization imputation scrna-seq diffusion-maps clustering-algorithm 3d umap normalization 10xgenomics cell-type-classification intractive-graph cite-seq singel-cell-sequencing pseudotime scvdj-seq icellr
  • Updated Oct 29, 2025
  • R

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